BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033A04SP1|AL429663
(903 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig646 1742 0.0
>3x_Contig646
Length = 2747
Score = 1742 bits (879), Expect = 0.0
Identities = 897/903 (99%)
Strand = Plus / Minus
Query: 1 gatcaatagtaatttcccctaaggaagttggattttggaagttcaattcaccatcttctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2120 gatcaatagtaatttcccctaaggaagttggattttggaagttcaattcaccatcttctt 2061
Query: 61 cgtcctcttcgtcgaatttccttgctttatcctgagtttccttcaaagcgttggaagcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2060 cgtcctcttcgtcgaatttccttgctttatcctgagtttccttcaaagcgttggaagcat 2001
Query: 121 tttgagcagccatcaatctaagtttttcatcatcttcagttgcgaagtcaatagattcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2000 tttgagcagccatcaatctaagtttttcatcatcttcagttgcgaagtcaatagattcta 1941
Query: 181 catttgtcttagaggcagcagtcttagtaaggtctactaccttattcttgttattcgaca 240
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 1940 catttgtcttagaggcagcagtcttagtaaggtctactaccttattgtttttattcgaca 1881
Query: 241 tagatgtcagtgaatcatcagtcatcgtaccttccaattcgttagttttaatcttactac 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1880 tagatgtcagtgaatcatcagtcatcgtaccttccaattcgttatttttaatcttactac 1821
Query: 301 caatgaaatgggagtacaactcagtttgagttaacaagaaattcaacttctttgcagctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1820 caatgaaatgggagtacaactcagtttgagttaacaagaaattcaacttctttgcagctc 1761
Query: 361 ttaaattttctctttgttcttcttccttctttgcttgttcaatagcttctttttcagcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1760 ttaaattttctctttgttcttcttccttctttgcttgttcaatagcttctttttcagcct 1701
Query: 421 tcttcttcatttctctttcttcacgttcattcttcttccagaaactagacatctctctta 480
||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||
Sbjct: 1700 tcttcttcatttctctttcttcacgttgattcttcttccagaaactagacatctgtgtta 1641
Query: 481 tacctctacgagccctagtttggaaatctttaacttgtctgaaatttctcatttgccatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1640 tacctctacgagccctagtttggaaatctttaacttgtctgaaatttctcatttgccatc 1581
Query: 541 ttcttgcttccttggcacatagtgaagaagttttcctgaaattctgacctcttattgact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1580 ttcttgcttccttggcacatagtgaagaagttttcctgaaattctgacctcttattgact 1521
Query: 601 gaatttgttgtaactgtcttgatatcctaccagaatctcttctagccatgtctttccata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1520 gaatttgttgtaactgtcttgatatcctaccagaatctcttctagccatgtctttccata 1461
Query: 661 tggtaatataggtttgatcgtaatgcctttggatagcacgagcctctttcaacgtgatct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1460 tggtaatataggtttgatcgtaatgcctttggatagcacgagcctctttcaacgtgatct 1401
Query: 721 tcataccataagtaggtaagtcgtgttccactcttctaacttgttgtggaggtggaggag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1400 tcataccataagtaggtaagtcgtgttccactcttctaacttgttgtggaggtggaggag 1341
Query: 781 gaggaggagcaagtttccgtttctttgcttcctcttctgcctttatcagagcctcttcgg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1340 gaggaggagcaagtttccgtttctttgcttcctcttctgcctttatcagagcctcttcgg 1281
Query: 841 ccttcctcttacgttcttcttcagcaaggtgtctcttgtacttacgaatatgcaattgtt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1280 ccttcctcttacgttcttcttcagcaaggtgtctcttgtacttacgaatatgcaattgtt 1221
Query: 901 tta 903
|||
Sbjct: 1220 tta 1218
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9356
Number of Sequences: 1807
Number of extensions: 9356
Number of successful extensions: 100
Number of sequences better than 1.0e-20: 1
length of query: 903
length of database: 10,358,551
effective HSP length: 16
effective length of query: 887
effective length of database: 10,329,639
effective search space: 9162389793
effective search space used: 9162389793
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)